研究成果

Review & Book 2019

Fujikawa, K.; Nishiyama, K. I.;Shimamoto, K.“Enzyme-like glycolipids MPIase involved in membrane protein integration of E. coli” Trends. Glycosci. Glyc., 31, E151-E158 [Publisher]; J149-J155 [Publisher] (2019).

Fujikawa, K.; Nomura, K.; Nishiyama, K. I.; Shimamoto, K. “Novel glycolipid involved in membrane protein integration: Structure and mode of action” J. Synth. Org. Chem. Jpn. 77, 1096-1105 (2019). [Publisher]

野村薫「GPI アンカー型タンパク質における脂質アンカーの役割解明」生物物理, 59(6), 295-299 (2019). [Publisher]

Nässel DR, Zandawala M, Kawada T, Satake H. (2019) “Tachykinins: Neuropeptides That Are Ancient, Diverse, Widespread and Functionally Pleiotropic.” Front Neurosci. 13, 1262. [PubMed]

Satake H, Larhammar D, Elphick MR. (2019) Editorial: “Endocrine and Neuroendocrine Systems of Invertebrate Deuterostomes.” Front Endocrinol (Lausanne). 10, 755. [PubMed]

佐竹 炎、白石 慧 (2019) 「機械学習を活用したペプチド‐受容体ペアの予測と実証」 バイオサイエンスとバイオインダストリー 55, 478-480.

佐竹 炎、白石 慧 (2019) 「そのマッチング、人工知能(AI)の力でお助けします –機械学習を駆使した新規ペプチド-受容体の高精度予測と実証」 比較内分泌学 45, 108-111.

佐竹 炎、白石 慧 (2019) 「見えないものを見抜く–機械学習を駆使した新規ペプチド受容体の高精度予測と実証」 ファルマシア 55, 924-928.

Satake H, Matsubara S, Shiraishi A, Yamamoto T, Osugi T, Sakai T, Kawada T. (2019) “Neuropeptides, Peptide Hormones, and Their Receptors of a Tunicate, Ciona intestinalis.” Results Probl Cell Differ. 68, 107-125. [PubMed]

Satake H, Matsubara S, Shiraishi A, Yamamoto T, Osugi T, Sakai T, Kawada T. (2019) “Peptide receptors and immune-related proteins expressed in the digestive system of a urochordate, Ciona intestinalis.” Cell Tissue Res. 377(3), 293-308. [PubMed]

高橋 俊雄 (2019) 「非神経性アセチルコリンによる腸幹細胞の分化・増殖、維持機構の解明」 Medical Science Digest 45(9), 41-43「Cutting Edge」

Takahashi T.(2019) “New trends and perspectives in the function of non-neuronal acetylcholine in crypt-villus organoids in mice.” Methods Mol. Biol. 1576, 145-155. [PubMed]

Takahashi T. (2019) “Organoids for Drug Discovery and Personalized Medicine.” Annu. Rev. Pharmacol. Toxicol. 59, 447-462. [PubMed]

Takahashi T. (2019) “Cnidarian peptide signaling molecules. Advances Invertebrate (Neuro)Endocrinology (Book Title), Saber saleuddin, Angela B. Lange, Ian Orchard (Editors), APPLE ACADEMIC PRESS.” In Press.

川田 剛士佐竹 炎 (2019) 「オキシトシン/バソプレシンファミリーの起源と進化」脳神経内科 90, 261-269.

梅澤 俊明、山村 正臣、小埜 栄一郎、白石 慧、サフェンドリ・コマーラ・ラガムスタリ (2019) 「リグナン OMT に関する最新研究動向」木材学会誌 65(1), 1-12.

堀川 学小山 知嗣、寺正行 (2019) 「植物におけるセサミン結合タンパク質の同定と機能探索」 バイオサイエンスとインダストリー(印刷中)

Original Paper 2018

Fujikawa, K., Suzuki, S., Nagase, R., Ikeda, S., Mori, S., Nomura, K., Nishiyama,K., Shimamoto, K., “Syntheses and activities of the functional structures of a glycolipid essential for membrane protein integration” ACS Chem. Biol., 13, 2719–2727 (2018) [Publisher] (open access)

Mori, S., Sugahara, K., Maeda, M., Shimamoto, K., Iwashita, T., Yamagaki, T. “Truncated palytoxin analogue, palytoxin carboxylic acid, isolated as an insecticidal compound from the red alga, Chondria armata.” Tetrahedron Lett. 59, 4420–4425 (2018). [Publisher] (open access)

Tera, M., Harati Taji, Z., Luedtke, N. W. “Intercalation-enhanced “Click” Crosslinking of DNA.” Angew. Chem. Int. Ed. 57, 15405–15409 (2018). [Publisher]

Tera, M., Glasauer, S., Luedtke, N. W. “Incorporation of azide groups into DNA using membrane-permeable nucleotide triesters in vivo.” ChemBioChem 19, 1939–1943 (2018). [Publisher]

Murakami, Y., Iwabuchi, H., Horikawa, M., Mori, S., Ohba, Y., Fukami, H. “Isolation and identification of a volatile compound in Habanero pepper (Capsicum chinense).” J. Oleo Sci. 67, 1219-1225 (2018). [PubMed] (open access)

Morishima, K., Nakamura, N., Matsui, K., Tanaka, Y., Masunaga, H.,Mori, S.,Iwashita, T., Li, X., Shibayama, M. “Formation of clusters in whiskies during the maturation process.” J. Food Sci. 84, 59–64 (2019). [Publisher] (open access)

Ono, E., Murata, J., Toyonaga, H., Nakayasu, M., Mizutani, M., Yamamoto, M. P., Umezawa, T., Horikawa, M. “Formation of a methylenedioxy bridge in (+)-epipinoresinol by CYP81Q3 corroborates with diastereomeric specialization in sesame lignans.” Plant Cell Physiol. 59, 2278-2287 (2018). [Publisher] (open access)

Okitsu, N., Matsui, K., Horikawa, M., Sugahara, K., Tanaka, Y. “Identification and characterization of novel Nemophila menziesii flavone glucosyltransferases that catalyze biosynthesis of flavone 7,4′-O-diglucoside, a key component of blue metalloanthocyanins.” Plant Cell Physiol. 59, 2075-2085 (2018). [Publisher] (open access)

Satoh T, Iitsuka T, Shiraishi A, Hozumi A, Satake H, Sasakura Y. (2018) “piRNA-like small RNAs are responsible for the maternal-specific knockdown in the ascidian Ciona intestinalis Type A.” Sci Rep. 8(1), 5869. [PubMed] open access

Takahashi T, Shiraishi A, Murata J. (2018) The coordinated activities of nAChR and Wnt signaling regulate intestinal stem cell function in mice. Int. J. Mol. Sci. 19, E738. [PubMed] open access

Koyama T, Sato F. (2018) “The function of ETHYLENE RESPONSE FACTOR genes in the light-induced anthocyanin production of Arabidopsis thaliana leaves”. Plant Biotechnol. 35, 87-92. [PubMed] open access

Review & Book 2018

山垣亮「UV-MALDI-MS によるフラボノイド配糖体構造異性体の識別とレーザー励起による水素ラジカル脱離」J. Mass Spectrom. Soc. Jpn., 66(5), 197-203 (2018). [Publisher]

堀川学 山本将之 小埜栄一郎 村田純「ひらけごま!見えてきたゴマリグナンの生合成機構」化学と生物, 56 (11), 738-746 (2018). [Publisher]

藤川紘樹「シャペロン様活性を有する糖鎖類縁体」Trends. Glycosci. Glyc., 30, E241-E243 [Publisher]; J201-J202 [ Publisher](2018).

Namba K, Murata Y. (2018) “Organic Chemistry Research on the Mechanistic Elucidation of Iron Acquisition in Barley.” Biol Pharm Bull. 41(10):1502-1507. [J-Stage]]

村田 佳子 (2018) 第 20 章ムギネ酸 p133-140、化学のとびら 64 天然物の化学 II 自然からの贈り物 上村大輔編 東京化学同人

Koyama T. (2018) “A hidden link between leaf development and senescence”. Plant Sci. 276, 105-110. [PubMed]

小山 知嗣 (2018)「葉の形を決めるマイクロ RNA ネットワーク」化学と生物 56, 774-776.[J-Stage]

山本 将之、堀川 学村田 純、小埜 栄一郎 (2018) 「代謝酵素が広げるゴマリグナンの多様性」 Sesame Newsletter (日本ゴマ科学会誌)

Original Paper 2017

Yamagaki,T., Makino, Y. “Fragmentation of oligosaccharides from sodium adduct molecules depends on the position of N-acetyl hexosamine residue in their sequences in mass spectrometry.”  Mass Spectrom. (Tokyo), 6, S0073 (2017). [PubMed] (open access) 

Nomura, K., Tanimoto, Y., Hayashi, F., Harada, E., Shan, X. Y., Shionyu, M., Hijikata, A., Shirai, T., Morigaki, K., Shimamoto, K. “The role of the prod1 membrane anchor in newt limb regeneration.” Angew Chem Int Ed Engl. 56, 270-274 (2017). [PubMed] (open access)

Nakamura M., Makino Y., Takagi C., Yamagaki T, Sato M., “Probing the catalytic site of rabbit muscle glycogen phosphorylase using a series of specifically modified maltohexaose derivatives.” Glycoconj J. 34, 563-574 (2017).

Hayashi, T., Osawa, A., Watanabe, T., Murata, Y., Nakayama, A., Namba K., “Development of 1,3a,6a-triazapentalene-labeled enterobactin as a fluorescence quenching sensor of iron ion” Tetrahedron Letters, 58, 1961-1964 (2017). [publisher]

Suno, R., Kimura, K.T., Nakane, T., Yamashita, K., Wang, J., Fujiwara, T., Yamanaka, Y., Im, D., Horita, S., Tsujimoto, H., Tawaramoto, M.S., Hirokawa, T., Nango, E., Tono, K., Kameshima, T., Hatsui, T., Joti, Y., Yabashi, M., Shimamoto,K., Yamamoto, M., Rosenbaum, D.M., Iwata, S., Shimamura, T., Kobayashi, T. “Crystal structures of human orexin 2 receptor bound to the subtype-selective antagonist EMPA.” Structure, 26, 7-19 (2017). [PubMed]

Murai, Y., Mori, S., Konno, H., Hikichi, Y., Kai, K. “Ralstonins A and B, lipopeptides with chlamydospore-inducing and phytotoxic activities from the plant pathogen Ralstonia solanacearumOrg. Lett., 19, 4175-4178 (2017). [publisher]

Satake, M., Cornelio, K, Hanashima, S., Malabed, R., Murata, M., Matsumori, N., Zhang, H., Hayashi, H., Mori, S., Kim, J. S., Kim, C.-H., Lee, J.-S. “Structures of the largest amphidinol homologues from the dinoflagellate Amphidinium carterae and structure−activity relationships” J. Nat. Prod., 80, 2883-2888 (2017). [publisher]

Fujimaki, T., Mori, S., Horikawa, M., Fukui, Y. “Isolation of proanthocyanidins from red wine, and their inhibitory effects on melanin synthesis in vitro” Food Chem., 248, 61-69 (2017). [publisher]

Murata J*, Ono E*, Yoroizuka S*, Toyonaga H, Shiraishi A, Mori S, Tera M, Azuma T, Nagano AJ, Nakayasu M, Mizutani M, Wakasugi T, Yamamoto MP, Horikawa M. (2017) “Oxidative rearrangement of (+)-sesamin by CYP92B14 co-generates twin dietary lignans in sesame.” Nat. Commun. 8, 2155. [PubMed] (* , equal contributors.) open access

Kurihara M, Otsuka K, Matsubara S, Shiraishi A, Satake H, Kimura AP. (2017) “A Testis-Specific Long Non-Coding RNA, lncRNA-Tcam1, Regulates Immune-Related Genes in Mouse Male Germ Cells.” Front Endocrinol. 8, 299. [PubMed] open access

Matsubara S, Shiraishi A, Sakai T, Okuda T, Satake H. (2017) “Heterodimerization of the prostaglandin E2 receptor EP2 and the calcitonin receptor CTR.” PLOS One. 12(11), e0187711. [PubMed] open access

Osugi T, Sasakura Y, Satake H. (2017) “The nervous system of the adult ascidian Ciona intestinalis Type A (Ciona robusta): Insights from transgenic animal models.” PLOS One. 12(6), e0180227. [PubMed]. open access

Kase Y, Ikari T, Sekiguchi T, Sato M, Ogiso S, Kawada T, Matsubara S, Satake H, Sasayama Y, Endo M, Kitamura KI, Hattori A, Watanabe TX, Maruyama Y, Watanabe Y, Funahashi H, Kambegawa A, Suzuki N. (2017) “Sardine procalcitonin amino-terminal cleavage peptide has a different action from calcitonin and promotes osteoblastic activity in the scales of goldfish.” Comp. Biochem. Physiol. A Mol. Integr. Physiol. 211, 77-83. [PubMed]

Kawada T, Shiraishi A, Aoyama M Satake H. (2017). “Transcriptomes of the premature and mature ovaries of an ascidian, Ciona intestinalis.” Front. Endocrinol. 8, 88. [PubMed] open access

Sekiguchi T,Shiraishi A, Satake H, Kuwasako K, Takahashi H, Sato M, Urata M, Wada S, Endo M, Ikari T, Hattori A, Srivastav AK, Suzuki N. (2017) “Calcitonin-typical suppression of osteoclastic activity by amphioxus calcitonin superfamily peptides and insights into the evolutionary conservation and diversity of their structures.” Gen. Comp. Endocrinol. 246, 294-300. [PubMed]

Takahashi T. (2017) Visualization of acetylcholine distribution in intestinal tissue sections by tandem imaging mass spectrometry and its function in mice. J. Neurochem. 142 (Suppl. 2), 203-204. [PubMed]

Koyama T, Sato F, Ohme-Takagi M. (2017) “Roles of miR319 and TCP transcription factors in leaf development”. Plant Physiol. 175, 874-885. [PubMed] open access

Kubota A, Ito S, Shim JS, Johnson R, Y Song Y, Breton G, Golembeski G, Kwon M, Laboy D,Koyama T, Ohme-Takagi M, Pruneda-Paz J, Kay S, MacCoss MJ, Imaizumi T. (2017) “TCP4-dependent Induction of CONSTANS Transcription Requires GIGANTEA in Photoperiodic Flowering in Arabidopsis”. PLOS Genet. 13, e1006856. [PubMed] open access

Review & Book 2017

藤川紘樹「グリコシル化反応における水素結合」Trends. Glycosci. Glyc., 29, E99-E100 [Publisher]; J75-J76 [Publisher] (2017). 

Sakai T, Shiraishi A, Kawada T, Matsubara S, Aoyama M, Satake H. (2017) “Invertebrate Gonadotropin-Releasing Hormone-Related Peptides and Their Receptors: An Update.” Front Endocrinol (Lausanne)8 , 217. [PubMed

高橋 俊雄 (2017) 「質量分析でアセチルコリンを”可視化する”技」 比較内分泌学 43(162) 141-142. 

Satake H, Shiraishi A, Koyama T, Matsumoto E, Morimoto K, Bahabadi, SE, Ono E, Murata J. (2017) “Lignan biosynthesis for food bioengineering. Handbook of Food Bioengineering”, Grumezescu AM and Holban AM, (eds.) p351-p379, Elsevier Inc, Netherland. 

Original Paper 2016

Yamagaki, T., Takeuchi, M., Watanabe, T., Sugahara, K., Takeuchi, T., Mechanism for odd-electron anion generation of dihydroxybenzoic acid isomers in matrix-assisted laser desorption/ionization mass spectrometry with density functional theory calculations. Rapid Commun. Mass Spectrom., 24, 2650-2654 (2016) [Publisher] (open access)

Mori S., Sugahara K., Maeda M., Nomoto K., Iwashita T., Yamagaki T., “Insecticidal activity guided isolation of palytoxin from a red alga, Chondria armata.” Tetrahedron Lett. 57, 3612-3617 (2016). [publisher] (open access)

Sugahara K., Horikawa M., Yamagaki T, “Amino-β-cyclodextrin complex assisted ionization for labile sesamins and their ionmobility separation in ESI Q-TOF MS.” Mass Spectrom. Lett. 6, 17-20 (2016) [Publisher] (open access)

Iwashita, T., Konuma, T., Harada, E., Mori, S., Sugase, K. “Use of glass capillaries to suppress thermal convection in NMR tubes in diffusion measurements.” Magn. Reson. Chem., 54, 729–733 (2016). [publisher]

Yasuno, Y., Hamada, M., Yoshida, K., Shimamoto, K., Shigei, Y., Akizawa, T., Konishi, M., Ohfune, Y., Shinada, T. “Structure-activity relationship study at C9 position of kaitocephalin.” Bioorg. Med.
Chem. Lett. 26, 3543-3546 (2016). [publisher]

Yasuno, Y., Hamada, M., Kawasaki, M., Shimamoto, K., Shigei, Y., Akizawa, T., Konishi, M., Ohfune, Y., Shinada, T. “(7S)-Kaitocephalin as a potent NMDA receptor selective ligand.” Org. Biomol. Chem., 14, 1206-1210. (2016). [publisher

Kabe, Y., Nakane, T., Koike, I.,Yamamoto, T., Sugiura, Y., Harada, E., Sugase, K.,Shimamura, T., Ohmura, M., Muraoka, K., Yamamoto, A., Uchida, T., Iwata, S.,Yamaguchi, Y., Krayukhina, E., Noda, M., Handa, H., Ishimori, K., Uchiyama, S., Kobayashi, T., Suematsu, M. “Haem-dependent dimerization of PGRMC1/Sigma-2 receptor facilitates cancer proliferation and chemoresistance.” Nat. Commun. 7, 11030 (2016). [PMC Free full text] doi: 10.1038/ncomms11030

Shiraishi A*, Murata J*, Matsumoto E, Matsubara S, Ono E, Satake H. (2016) “De novo transcriptomes of Forsythia koreana using a novel assembly method: insight into tissue- and species-specific expression of lignan biosynthesis-related gene. PLOS One. 11, e0164805. [PubMed] (*, equal contributors) open access

Sekiguchi T, Kuwasako K, Ogasawara M, Takahashi H, Matsubara S, Osugi T, Muramatsu I,Sasayama Y, Suzuki N, Satake H. (2016) “Evidence for conservation of the calcitonin superfamily and activity-regulating mechanisms in the basal chordate Branchiostoma floridae: insight into the molecular and functional evolution in chordates.” J. Biol. Chem. 291, 2345-2356. [PubMed] open access

Ono E, Handa T, Koeduka T, Toyonaga H, Tawfik MM, Shiraishi A, Murata J, Matsui K. (2016). CYP74B24 is the 13-hydroperoxide lyase involved in biosynthesis of green leaf volatiles in tea (Camellia sinensis). Plant Physiol. Biochem. 98, 112-118. [PubMed]

Ainsworth EV, Lockwood CW, White GF, Hwang ET, Sakai T, Gross MA, Richardson DJ, Clarke TA, Jeuken LJ, Reisner E, Butt JN. (2016) “Photoreduction of Shewanella oneidensis Extracellular Cytochromes by Organic Chromophores and Dye-Sensitized TiO(2).” Chembiochem. 17:2324-2333.
doi: 10.1002/cbic.201600339. [PubMed]

Harada E, Sugase K, Namba K, Murata Y. (2016) “The helical propensity of the extracellular loop is responsible for the substrate specificity of Fe(III)-phytosiderophore transporters” FEBS Lett. 590, 4617-4627. [PubMed] open access

Review & Book 2016

Shimamoto, K. “Elucidation of excitatory neurotransmission and membrane protein integration mechanisms.” Bull. Chem. Soc. Jpn., 89, 282-295 (2016). [Publisher

山垣亮「LC/MSのためのエレクトロスプレーイオン化法:基礎」J.Mass Spectrom. Soc. Jpn. 63, 11-16 (2016). [Publisher

島本啓子「脂質と膜タンパク」天然物の化学-魅力と展望-上村大輔編(東京化学同人)139-146 (2016) [Publisher

Matsubara, S., Kawada, T., Sakai, T., Aoyama, M., Osugi, T., Shiraishi, A., Satake, H. (2016) “The significance of Ciona intestinalis Äi0as a stem organism in integrative studies of functional evolution of the chordate endocrine, neuroendocrine, and nervous systems.” Gen. Comp. Endocrinol. 227, 101-108. [PubMed

Osugi, T., Son, Y.L., Ubuka, T., Satake, H., Tsutsui, K. (2016) “RFamide peptides in agnathans and basal chordates.” Gen. Comp. Endocrinol. 227, 94-100. [PubMed

Satake, H., Koyama, T., Matsumoto, E., Morimoto, K., Ono, E., Murata, J.(2016). “Metabolic Engineering of Lignan Biosynthesis Pathways for the Production of Transgenic Plant-Based Foods.” In: Transgenesis and Secondary Metabolism (Sumita Jha ed.). Springer International Publishing, Gewerbestrasse, Switzerland, pp. 1-26. [Publisher

荒木 良一、村田 佳子、村田 純 (2016)「アミノ酸類縁体、ムギネ酸類の植物生長促進メカニズムの解明、京都大学RIセンターニュース 60, 8-10. 

高橋 俊雄 (2016) 「多段階質量分析イメージングによる腸上皮組織中のアセチルコリン分布とその役割」 比較内分泌学 42(158) 49-50. 

高橋 俊雄 (2016) 「CompBiol 2015 合同シンポジウム」「”ポストオミクス時代における画像解析の最前線”顛末記」 比較生理生化学 33(1) 22-24. 

Original Paper 2015

Tera M., Hirokawa T., Okabe S., Sugahara K., Seimiya H., Shimamoto K., “Design and synthesis of a berberine dimer: A fluorescent ligand with high affinity towards G-quadruplexes” Chem. Eur. J., 21, 14519-14528 (2015). [Publisher]

Harada, E., Sugishima, M., Harada, J., Noguchi, M., Fukuyama, K., Sugase, K. “Backbone assignments of the apo and Zn(II) protoporphyrin IX-bound states of the soluble form of rat heme oxygenase-1.” Biomol. NMR Assign. 9, 197-200 (2015). [PubMed]

Harada, E., Sugishima., M., Harada., J., Fukuyama, K., Sugase, K. “Distal regulation of heme binding of heme oxygenase-1 mediated by conformational fluctuations.” Biochemistry 54, 340-348 (2015). [PubMed]

Ohgami, S., Ono, E., Horikawa, M., Murata, J., Totsuka, K., Toyonaga, H., Ohba, Y., Dohra, H., Asai, T., Matsui, K., Mizutani, M., Watanabe, N., Ohnishi, T. “Volatile glycosylation in tea plants: Sequential glycosylations for the biosynthesis of aroma β-primeverosides are catalyzed by two Camellia sinensis glycosyltransferases” Plant Physiology, 168, 464-477 (2015).[Free full text]

Konuma, T., Harada, E., Sugase, K. “Extracting protein dynamics information from overlapped NMR signals using relaxation dispersion difference NMR spectroscopy.” J. Biomol. NMR. 63, 367-373 (2015). [PubMed]

Murata J, Matsumoto E, Morimoto K, Koyama T, Satake H. (2015) “Generation of triple-transgenic Forsythia cell cultures as a platform for the efficient, stable, and sustainable production of lignans.” PLOS One. 10, e0144519. [PubMed] open access

Nagasawa, K.,* Osugi, T.,* Suzuki, I., Itoh, N., Takahashi, K.G., Satake, H., Osada, M. (2015) “Characterization of GnRH-like peptides from the nerve ganglia of Yesso scallop, Patinopecten yessoensis.” Peptides 71, 202-210. [PubMed] (*, equal contributors) open access

Natsume, S., Takagi, H., Shiraishi, A., Murata, J., Toyonaga, H., Patzak, J., Takagi, M., Yaegashi, H., Uemura, A., Mitsuoka, C., Yoshida, K., Krofta, K., Satake, H., Terauchi, R., Ono, E. (2015) “The draft genome of hop (Humulus lupulus), an essence for brewing.” Plant Cell Physiol. 56, 428-441. [PubMed] open access

Araki R, Kousaka K, Namba K, Murata Y, Murata J. (2015) 2’-Deoxymugineic acid promotes growth of rice (Oryza sativa L.) by orchestrating iron and nitrate uptake processes under high pH conditions. Plant J. 81, 233-246. [PubMed] open access

Murata J, Watanabe T, Sugahara K, Yamagaki T, Takahashi T. (2015) High-resolution mass spectrometry for detecting Acetylcholine in Arabidopsis. Plant Signal. Behav. 10, e1074367. [PubMed] open access

Murata Y, Itoh Y, Iwashita T, Namba K. (2015) “Transgenic petunia with the iron(III)-phytosiderophore transporter gene acquires tolerance to iron deficiency in alkaline environments.” PLOS One. 10, e0120227. [PubMed] open access

Review & Book 2015

菅原孝太郎「NMRを使って天然物の構造を調べる」現代化学, 6月号, 36-37 (2015). [Publisher

Satake, H., Koyama, T., Bahabadi, S.E., Matsumoto, E., Ono, E., Murata, J. (2015) “Essences in metabolic engineering of lignan biosynthesis.” Metabolites. 5, 270-290. [PubMed

Araki R, Namba K, Murata Y, Murata J. (2015) Phytosiderophores revisited: 2’-deoxymugineic acid-mediated iron uptake triggers nitrogen assimilation in rice (Oryza sativa L.) seedlings. Plant Signal. Behav. 10, e1031940. [PubMed]

Takahashi, T. (2015) “Non-neuronal functions of acetylcholine via muscarinic receptor subtypes: cellular proliferation and differentiation in mammals.” Neurotransmitter 2, e499.[Smart Science Technology]

Takahashi, T., Takeda, N. (2015) “Insight into the molecular and functional diversity of cnidarian neuropeptides.” Int. J. Mol. Sci. 16, 2610-2625. [PubMed]

森下 文浩、高橋 俊雄 (2015) 「研究者が教える動物実験」 生理活性ペプチドを“見つける”技」 日本比較生理生化学会編集 2, 187-190.

高木 基成、白石 慧、小埜 栄一郎 (2015) 「ホップゲノムから栽培化の歴史を紐解く」 バイオサイエンスとインダストリー 73(4), 297-299.

小山 知嗣 (2015) 「葉の凹凸形態形成の制御機構」BSJ review 6, 112-125. [Publisher]

Martinis D, Koyama T, Chang C. (2015) “Ethylene is all around”. Front. Plant Sci. 6, 76 [PubMed]

Original Paper 2014

Yamagaki, T., Watanabe, T., Tanaka, M., Sugahara, K., “Laser-induced hydrogen radical removal in MALDI-MS allows for the differentiation of flavonoid monoglycoside isomers” J. Am. Soc. Mass Spectrom., 25, 88-94 (2014). [PMC Free full text]

Yamagaki, T., Sugahara, K., Watanabe, T., “Amino and acetamide functional group effects on the ionization and fragmentation of sugar chains in positive-ion mass spectrometry.” J. Am. Soc. Mass Spectrom., 25, 95-103 (2014) [Publisher][PMC Free full text] (open access)

Nomura, K., Harada, E., Sugase, K., Shimamoto, K. “Solid-state NMR spectra of lipid-anchored proteins under magic angle spinning.” J. Phys.Chem. B. 118, 2405-2413 (2014). [PubMed]

Noguchi, A., Horikawa, M., Murata, J., Tera, M., Kawai, Y., Ishiguro, M., Umezawa, T., Mizutani, M., Ono, E. “Mode-of-action and evolution of methylenedioxy bridge forming P450s in plant specialized metabolism” Plant Biotechnology 31, 493-503 (2014). [Free full text]

Martinov, V., Dehnes, Y., Holmseth, S., Shimamoto, K., Danbolt, N. C., Valen, G. “A novel glutamate transporter blocker, LL-TBOA, attenuates ischaemic injury in the isolated, perfused rat heart despite low transporter levels.” Eur. J. Cardiothorac. Surg. 45, 710-716 (2014). [PubMed]

Sasaki, S., Suzuki, H., Ouchi, H., Asakawa, T., Inai, M., Sakai, R., Shimamoto, K., Hamashima, Y., Kan, T. “Practical synthesis of kainoids: a new chemical probe precursor and a fluorescent probe.” Org Lett. 16, 564-567 (2014). [PubMed]

Okazawa, A., Kusunose, T., Ono, E., Kim, H.-J., Satake, H., Shimizu, B., Mizutani, M., Seki, H., Muranaka, T. (2014) “Glucosyltransferase activity of Arabidopsis UGT71C1 towards pinoresinol and lariciresinol.” Plant Biotechnol. 31, 561-566. [J-Stage] open access

Bahabadi, S.E., Sharifi, M., Chashmi, N.A. Murata, J.,Satake, H. (2014) “Significant enhancement of lignans accumulation in hairy root cultures of Linum album using biotic elicitors” Acta Physiol. Plant. 36, 3325–3331 [Publisher]

Kamiya, C., Ohta, N., Ogura, Y., Yoshida, K., Horie, T., Kusakabe, T.G., Satake, H., Sasakura, Y. (2014) “Nonreproductive role of gonadotropin-releasing hormone in the control of ascidian metamorphosis.” Dev. Dyn. 243, 1524-1535. [PubMed] open access

Kurihara, M., Shiraishi, A., Satake, H., Kimura A.P. (2014) “A conserved noncoding sequence can function as a spermatocyte-specific enhancer and a bidirectional promoter for a ubiquitously expressed gene and a testis-specific long noncoding RNA.” J. Mol. Biol. 426, 3069-3093. [PubMed]

Bahabadi, S.E., Sharifi, M., Murata, J., Satake, H. (2014) “The Effect of Chitosan and Chitin Oligomers on Gene Expression and Lignan Production in Linum album Cell Cultures.” J. Med. Plant. 13, 46-53. [Publisher]

Noguchi A, Horikawa M, Murata J, Tera M, Kawai Y, Ishiguro M, Umezawa T, Mizutani M, Ono E. (2014) Mode-of-action and evolution of methylenedioxy bridge forming cytochrome P450s in plant specialized metabolism. Plant Biotechnol. 31, 1-11. [Publisher] open access

Takahashi, T., Ohnishi, H., Sugiura, Y., Honda, K., Suematsu, M., Kawasaki, T., Deguchi, T., Orihashi, K., Hippo, Y., Watanabe, T., Yamagaki, T., Yuba, S. (2014) “Non-neuronal acetylcholine as an endogenous regulator of proliferation and differentiation of Lgr5-positive stem cells in mice.” FEBS J. 281, 4672-4690. [PubMed] open access

Review & Book 2014

Nomura,K., Kusumoto,S. “CHAPTER 9, Lipopolysaccharide induces raft domain expansion in a cholesterol-containing membrane” in Advances in Biological Solid-State NMR : Proteins and membrane-active peptides (Separovic F. and Naito A. eds.), Royal Society of Chemistry, Rondon, 162-179 (2014). [Publisher

Nishiyama, K., Shimamoto, K. “Glycolipozyme membrane protein integrase (MPIase): recent data. ” BioMolecular Concepts, 5, 429-438.(2014). [Publisher

島本啓子 西山賢一 「タンパク質ではない酵素?-タンパク質膜挿入の鍵を握るグライコリポザイム」「実験医学増刊驚愕の代謝システム」実験医学, 32, 115-122 (2014). [Publisher] 

Koyama T. (2014) “Roles of ethylene and transcription factors in the regulation of onset of leaf senescence.” Front. Plant Sci. 5, 650. [PubMed

Original Paper 2013

Nagata, A., Hamamoto, A., Horikawa, M., Yoshimura, K., Takeda, S., Saito, Y. “Characterization of ciliary targeting sequence of rat melanin-concentrating hormone receptor 1.” Gen. Comp. Endocrinol. 188, 159-165 (2013). [PubMed]

Mizohata, E., Okuda, T., Hatanaka, S., Nakayama, T., Horikawa, M., Nakayama, T., Ono, E., Inoue, T. “Crystallization and preliminary X-ray crystallographic analysis of UDP-glucuronic acid:flavonol-3-O glucuronosyltransferase (VvGT5) from the grapevine Vitis vinifera.” Acta Crystallogr. Sect. F Struct. Biol. Cryst. Commun. 69, 65-68 (2013). [PubMed] [PMC Free full text]

Iida K., Yoshida W., Nakamura T., Tera M., Nakabayashi K., Hata K., Ikebukuro K., Nagasawa K., “Fluorescent ligand-mediated screening of G-quadruplex structure using a DNA microarray” Angew. Chem. Int. Ed., 52, 12052-12055 (2013). [Publisher]

Chung W. J., Heddi B., Tera M., Iida K., Nagasawa K., Phan A. T., “Solution structure of an intramolecular (3 + 1) human telomeric G-quadruplex bound to a telomestatin derivative” J. Am. Chem. Soc., 135, 13495-13501 (2013). [Publisher]

Raj, H., Szymanski, W., de Villiers, J., Puthan Veetil, V., Quax, W. J., Shimamoto,K., Janssen D. B., Feringa, B. L., Poelarends, G. J. “Kinetic resolution and stereoselective synthesis of 3-substituted aspartic acids by using engineered methylaspartate ammonia lyases.” Chemistry, 19, 11148-11152 (2013). [PubMed]

Morimoto, K., Satake, H. (2013) “Seasonal alteration in amounts of lignans and their glucosides and gene expression of the relevant biosynthetic enzymes in the Forsythia suspense leaf.” Biol. Pharm. Bull. 36, 1519-1523. [PubMed] open access

Hata, N., Hayashi, Y., Ono, E., Satake, H., Kobayashi, A., Muranaka, T., Okazawa, A. (2013) “Differences in plant growth and leaf sesamin content of the lignan-rich sesame variety ‘Gomazou’ under continuous light of different wavelengths.” Plant Biotechnol. 30, 1-8. [J-Stage] open access

Hozumi, A., Mita, K., Hackett, P, Miskey, C., Mates, L., Izsvak, Z., Ivics, Z., Satake, H., Sasakura, Y. (2013) “Germline transgenesis of the chordate Ciona intestinalis with hyperactive variants of sleeping beauty transposable element.” Dev. Dyn. 242, 30-43. [PubMed] open access

Matsui, T., Sakai, T., Satake, H., Takeda M. (2013) “The pars intercerebralis affects digestive activities of the American cockroach, Periplaneta Americana, via crustacean cardioactive peptide and allatostatin-A.” J. Insect Physiol. 59, 33-37. [PubMed]

Takaku, Y., Shimizu, H., Takahashi, T., Fujisawa, T. (2013) “Subcellular localization of the epitheliopeptide, Hym-301 in hydra.” Cell Tissue Res. 351, 419-424. [PubMed]

Takeda, N., Nakajima, Y., Koizumi, O., Fujisawa, T., Takahashi, T., Matsumoto, M., Deguchi, R. (2013). “Neuropeptides trigger oocyte maturation and subsequent spawning in the hydrozoan jellyfish Cytaeis uchidae.” Mol. Reprod. Dev. 80, 223-232. [PubMed] open access

Sakai T, Mersch D, Reisner E. (2013) “Photocatalytic hydrogen evolution with a hydrogenase in a mediator-free system under high levels of oxygen.” Angew Chem Int Ed Engl. 252, 12313-12316. [PubMed] open access

Review & Book 2013

西山賢一 島本啓子「膜タンパク質の鍵は糖脂質にあり-すべての生体膜挿入に必要な因子を求めて-」化学 68, 30-34 (2013) [Publisher

Satake, H., Matsubara, S., Aoyama, M., Kawada, T. Sakai, T.(2013) “GPCR heterodimerization in the reproductive system: functional regulation and implication for biodiversity.” Front. Endocrinol. 4, 100. [PubMed]

Satake, H., Ono, E., Murata, J. (2013) “Recent advances in metabolic engineering of lignan biosynthesis pathways for the production of transgenic plant-based foods and supplements” J. Agric. Food Chem. 61, 11721-11729. [PubMed]

Satake, H., Aoyama, M., Sekiguchi, T., Kawada, T. (2013) “Insight into molecular and functional diversity of tachykinins and their receptors” Prot. Pept. Lett. 20, 615-627. [PubMed]

Kawada, T., Aoyama, M., Sakai, T., Satake, H. (2013) “Structure, function, and evolutionary aspects of invertebrate GnRHs and their receptors.” In: Gonadotropin-Releasing Hormone (GnRH): Production, Structure and Functions. Nova Science Publishers Inc. pp. 1-16. [Publisher]

Takahashi, T. (2013) “Neuropeptides and epitheliopeptides: Structure and functional diversity in an ancestral metazoan Hydra.” Prot. Pept. Lett. 20, 671-680. [PubMed]

Original Paper 2012

Nishiyama, K., Maeda, M., Nagase, R., Yanagisawa, K., Komura, H., Iwashita, T., Yamagaki, T., Kusumoto, S., Tokuda, H., Shimamoto, K. (2012) “MPIase is a glycolipozyme essential for membrane protein integration.” Nature Commun. 3, DOI: 10.1038/ncomms2267. [PubMed]

Yamagaki, T., Watanabe, T.. “Hydrogen radical removal causes complex overlapping isotope patterns of aromatic carboxylic acids in negative-ion matrix-assisted laser desorption/ionization mass spectrometry” Mass Spectrom., 1, A0005 (2012) [Publisher] (Open access)

Yoshinaka-Niitsu A., Yamagaki T., Harada M., Tachibana K.. “Solution NMR analysis of the binding mechanism of DIVS6 model peptides of voltagegated sodium channels and the lipid soluble alkaloid veratridine.” Bioorg. Med. Chem., 20, 2796-2802 (2012). [Publisher]

Sayama, T., Ono, E., Takagi, K., Takada, Y., Horikawa, M., Nakamoto, Y., Hirose, A., Sasama, H., Ohashi, M., Hasegawa, H., Terakawa, T., Kikuchi, A., Kato, S., Tatsuzaki, N., Tsukamoto, C., Ishimoto, M. “The Sg-1 glycosyltransferase locus regulates structural diversity of triterpenoid saponins of soybean.” Plant Cell. 24, 2123-2138 (2012). [Publisher] (open access)

Minagawa, S., Inami, H., Kato, T., Sawada, S., Yasuki, T., Miyairi, S., Horikawa,M., Okuda, J., Gotoh, N. “RND type efflux pump system MexAB-OprM of pseudomonas aeruginosa selects bacterial languages, 3-oxo acyl-homoserine lactones, for cell-to-cell communication.” BMC Microbiol.12, 70 (2012), DOI: 10.1186/1471-2180-12-70. [Publisher] (open access)

Hamamoto, A., Horikawa, M., Saho, T., Saito, Y. “ Mutation of Phe318 within the NPxxY(x)(5,6)F motif in melanin-concentrating hormone receptor 1 results in an efficient signaling activity. Front. Endocrinol. (Lausanne). 26, 147 (2012). [Publisher] (open access)

Kusakabe, T.G., Sakai, T., Aoyama, M., Kitajima, Y., Miyamoto, Y., Takigawa, T., Daido, Y., Fujiwara, K., Terashima, Y., Sugiuchi, Y., Matassi, G., Yagisawa, H., Park, M.-K., Satake, H., Tsuda M. (2012) “A conserved non-reproductive GnRH system in chordates.” PLoS One 7, e41955. [PubMed] open access

Deguchi, T., Kawasaki, T., Ohnishi, H., Yuba, S., Takahashi T. (2012) “Identification and developmental expression of leucine-rich repeat-containing G protein-coupled receptor 6 (lgr6) in the medaka fish, Oryzias Latipes.” Dev. Genes Evol. 222, 217-227. [PubMed] open access

Suzuki, N., Sekiguchi, T., Satake, H., Kato, K., Nishiyama, Y., Takahashi, H., Danks, J.A.., Martin, J., Hattori, A.., Nakano, M., Kakikawa, M., Yamada, S., Ogoshi, M., Hyodo, S., Yamaguchi, Y., Chowdhury, V.S., Hayakawa, K., Funahashi, H., Sakamoto, T., Sasayama, Y. (2012) “Cloning of two members of the calcitonin-family receptors from stingray, Dasyatis akajei: Possible physiological roles of the calcitonin family in osmoregulation” Gene. 499, 326-331. [PubMed]

Sekiguchi, T., Ogasawara, M., Satake, H. (2012) Molecular and functional characterization of cionin receptors in the ascidian, Ciona intestinalis: the evolutionary origin of the vertebrate cholecystokinin/gastrin family.” J. Endocrinol. 213, 99-106. [PubMed]

Sakai, T., Aoyama, M., Kawada, T., Kusakabe, T., Tsuda, M., Satake, H. (2012) “Evidence for differential regulation of GnRH signaling via heterodimerization among GnRH receptor paralogs in the protochordate, Ciona intestinalis.” Endocrinology. 153, 1841-1849. [PubMed] open access

Aoyama, M., Kawada, T., Satake, H. (2012) “Localization and enzymatic activity profiles of the proteases responsible for tachykinin-directed oocyte growth in the protochordate, Ciona intestinalis.” Peptides. 34, 186-192. [PubMed]

Bahabadi, S.E., Sharifi, M., Behmanesh, M., Safaie, N., Murata, J., Araki, R., Yamagaki, T., Satake,H. (2012) Time-course changes in fungal elicitor-induced lignan synthesis and expression of the relevant genes in cell cultures of Linum album. J. Plant Physiol. 169, 487-491. [PubMed]

Hata, N., Hayashi, Y., Okazawa, A., Ono, E., Satake, H., Kobayash, A. (2012) “Effect of photoperiod on growth of the plants, and sesamin content and CYP81Q1 gene expression in the leaves of sesame (Sesamum indicum L.).” Envir. Exp. Bot. 75, 212-219. [Publisher]

Review & Book 2012

荒木良一 (2012)「オオムギのムギネ酸類金属錯体輸送体の解明」バイオサイエンスとインダストリー 70, 280-281.

Satake, H., Sekiguchi, T., Sakai, T., Aoyama, M. Kawada, T. (2012) “Endocrinology and neuroendocrinology of protochordates: evolutionary views and potentials as new model organisms.” Recent Res. Devel. Endocrinol. 5, 1-19.

川田剛士 (2012) 「オキシトシン / バソプレシンファミリーペプチドの起源を探る」 比較内分泌学 38, 116-121.

Satake, H., Sekiguchi, T. (2012) “Toll-like receptors of deuterostome invertebrates.” Front. Immunol. 3, 34. [PubMed]

Takahashi, T., Horikawa, M. (2012) Evolutionary aspects of molecular forms and biological functions of acetylcholinesterase in Handbook of Cholinesterase: Production, Uses and Health Effects. (Cecelia J.W. and Janice E.T. eds.), Nova Science Publications, Inc. Hauppauge, NY, pp147-163. [Publisher]

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